mimicINTweb provides an easy-to-use interface to the mimicINT workflow to infer interactions between a set of microbial proteins of interest and the human proteome, using known interaction templates (motif-domain and domain-domain).
If you use mimicINTweb in your work, please do not forget to cite us! Choteau et al. (2022) mimicINT: a workflow for microbe-host protein interaction inference. bioRxiv, https://doi.org/10.1101/2022.11.04.515250
Latest updates on mimicINT and mimicINTweb
Update 3 - Papers using mimicINT
Young et al. A gut meta-interactome map reveals modulation of human immunity by microbiome effectors. bioRxiv, 2023. https://doi.org/10.1101/2023.09.25.559292 Halwachs et al. Modulation of human kinase activity through direct interaction with SARS-CoV-2 proteins. bioRxiv, 2023 https://doi.org/10.1101/2023.11.27.568816
Update 2 - mimicINT domain score - October 20, 2023
We have implemented the mimciINT domain score also on micmiINTweb. You can now download a subset of the predicted interaction that fulfill the domain score filtering threshold.
Update 1 - mimicINTweb beta version online - September 1, 2023
First beta release of mimicINTweb is finally online for internal use.
Update 4 - Papers using mimicINT
Slivak et al. InteractORF, predictions of human sORF functions from an interactome study. bioRxiv, 2024. https://doi.org/10.1101/2024.06.10.598216